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Series GSE153260 Query DataSets for GSE153260
Status Public on Jun 10, 2021
Title The clinical significance of regulatory variants at the GDF5 locus in joint disease
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genetic variants in cis-regulatory regions of GDF5 can lead to common joint diseases with high degrees of joint specificity.
 
Overall design Examination of open chromatin regions in multiple different growth plates (proximal vs distal femur, tibia) and acetabulum at E67
 
Contributor(s) Capellini TD, Richard D, Young M, Muthuirulan P
Citation(s) 34230488
Submission date Jun 25, 2020
Last update date Jul 16, 2021
Contact name Terence D Capellini
E-mail(s) drichard@g.harvard.edu, tcapellini@g.harvard.edu
Phone 6173010673
Organization name Harvard Univserity
Department Human Evolutionary Biology
Lab Capellini
Street address 11 Divinity Avenue
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (5)
GSM4637146 ATAC-seq proximal femur E67
GSM4637147 ATAC-seq distal femur E67
GSM4637148 ATAC-seq proximal tibia E67
Relations
BioProject PRJNA641883
SRA SRP268820

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153260_RAW.tar 1.9 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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