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Series GSE153183 Query DataSets for GSE153183
Status Public on Jun 25, 2020
Title Gene expression profiling of drug-tolerant persister PC9 non-small cell lung cancer cells derived from osimertinib treatment
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Targeting drug tolerant persister (DTP) cells may present a therapeutic opportunity to eliminate residual surviving tumor cells and impede relapse. We sought to identify therapeutically exploitable vulnerabilities in DTP cells using the EGFR-mutant non-small cell lung cancer cell line PC9 as an experimental model. Here we provide RNAseq gene expression profiling data generated from parental PC9 cells compared to PC9 DTP cells generated from nine days of treatment with 2 uM osimertinib. These data can be used to identify genes and pathways which are upregulated in DTP cells, revealing potential therapeutic targets.
 
Overall design two biological replicates of PC9 parental and DTP cells
 
Contributor(s) Nie M, Chen N, Pang H, Hu Z
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Submission date Jun 24, 2020
Last update date Jun 27, 2020
Contact name Meng Nie
E-mail(s) doublea8@126.com
Phone 18810489032
Organization name Tsinghua University
Street address Haidian District
City Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (4)
GSM4635290 PC9 Parental rep2
GSM4635291 PC9 Parental rep3
GSM4635292 PC9 DTP rep1
Relations
BioProject PRJNA641683
SRA SRP268690

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153183_FPKM_matrix.txt.gz 400.1 Kb (ftp)(http) TXT
GSE153183_RAW.tar 610.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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