|
| Status |
Public on May 23, 2021 |
| Title |
Time-course RNA-seq analysis of salt resonse in Arabidopsis and Marchantia |
| Organisms |
Marchantia polymorpha; Arabidopsis thaliana; Oryza sativa Japonica Group |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Purpose: To understand the dynamic salt-sress response in Arabidopsis and Marchantia
|
| |
|
| Overall design |
7-day old Arabidopiss seedlings , rice seedlings and Marchantia gemmalings were subjected to 100 mM NaCl for 0, 1, 2, 3, 6, 12, 24,48 and 72 hr, 2-3 biological replicates
|
| |
|
| Contributor(s) |
Wu T, Urano D |
| Citation(s) |
34045707 |
| Submission date |
Jun 23, 2020 |
| Last update date |
Aug 22, 2021 |
| Contact name |
Daisuke Urano |
| Organization name |
Temasek Life Science Laboratory
|
| Street address |
1 Research Link
|
| City |
Sinagpore |
| ZIP/Postal code |
117604 |
| Country |
Singapore |
| |
|
| Platforms (5)
|
| GPL21785 |
Illumina HiSeq 4000 (Arabidopsis thaliana) |
| GPL21812 |
Illumina HiSeq 4000 (Oryza sativa Japonica Group) |
| GPL26208 |
Illumina NovaSeq 6000 (Arabidopsis thaliana) |
| GPL28762 |
Illumina HiSeq 4000 (Marchantia polymorpha) |
| GPL28764 |
Illumina NovaSeq 6000 (Marchantia polymorpha) |
|
| Samples (80)
|
|
| Relations |
| BioProject |
PRJNA641427 |
| SRA |
SRP268513 |
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