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Series GSE152925 Query DataSets for GSE152925
Status Public on Aug 17, 2020
Title Inhibition of MAN2A1 enhances tumor response to anti-PD-L1
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Immune checkpoint blockade (ICB) has shown remarkable efficacy, but in only a minority of cancer patients, suggesting the need to develop additional treatment strategies.We integrated transcriptional profiles of treatment-naïve human tumors and functional CRISPR screens to identify glycometabolism genes with immunomodulatory effects. We identified MAN2A1, encoding an enzyme in N-glycan maturation, as a key immunomodulatory gene. Analyses of public immune checkpoint blockade trial data also suggested a synergy between MAN2A1 inhibition and anti-PD-L1 treatment. Loss of Man2a1 in cancer cells increased their sensitivity to T cell-mediated killing. Man2a1 knockout enhanced response to anti-PD-L1 treatment and facilitated higher cytotoxic T cell infiltration in tumors under anti-PD-L1 treatment. Furthermore, a pharmacological inhibitor of MAN2A1, swainsonine, synergized with anti-PD-L1 in syngeneic melanoma tumor model, whereas each treatment alone had little effect.
 
Overall design Wildtype or Man2a1 knockout B16F10 treated with IgG isotype control or anti-PD-L1 or swainsonine or the combination of anti-PD-L1 and swainsonine.
 
Contributor(s) Shi S, Gu S
Citation(s) 32723834
Submission date Jun 21, 2020
Last update date Nov 18, 2020
Contact name jun ge
E-mail(s) junge960214@gmail.com
Phone 18019176603
Organization name Tongji University
Department School of Life Sciences and Technology
Street address 1239 Siping Road
City Shanghai
ZIP/Postal code 200000
Country China
 
Platforms (2)
GPL23479 BGISEQ-500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (28)
GSM4629808 B16_sgMan2a1_1 [B16-42]
GSM4629809 B16_sgMan2a1_2 [B16-43]
GSM4629810 B16_sgRosa26_1 [B16-46]
Relations
BioProject PRJNA640958
SRA SRP268213

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152925_B16_C57BL6_invivo_RawCount.txt.gz 592.5 Kb (ftp)(http) TXT
GSE152925_B16_C57BL6_invivo_TPM.txt.gz 688.3 Kb (ftp)(http) TXT
GSE152925_koMan2a1_B16_C57BL6_invivo_RawCount.txt.gz 596.1 Kb (ftp)(http) TXT
GSE152925_koMan2a1_B16_C57BL6_invivo_TPM.txt.gz 1.1 Mb (ftp)(http) TXT
GSE152925_koMan2a1_B16_RawCount.txt.gz 161.3 Kb (ftp)(http) TXT
GSE152925_koMan2a1_B16_TPM.txt.gz 189.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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