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Series GSE152414 Query DataSets for GSE152414
Status Public on Dec 24, 2020
Title RNA-seq in Hs578T cells stimulated with TGF-β
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Transforming growth factor-β (TGF-β) comprises a key component in the tumor microenvironment. It is reported that TGF-β can be pro-tumorigenic or anti-tumorigenic depending on various contexts. Some of the triple negative breast cancers highly express TGF-β, but pro-tumorigenic function of TGF-β in triple negative breast cancer cells is not fully known. Therefore, we analyzed genome-wide gene expression changes after stimulation with TGF-β in a triple negative breast cancer cell line, Hs578T cells.
Overall design Expression of mRNA in Hs578T cells stimulated with TGF-β.
Contributor(s) Tamura Y, Koinuma D, Miyazono K
Citation(s) 33342034
Submission date Jun 13, 2020
Last update date Dec 24, 2020
Contact name Daizo Koinuma
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (4)
GSM4614928 Hs578T, unstimulated control, replicate 1
GSM4614929 Hs578T stimualted with TGF-β, replicate 1
GSM4614930 Hs578T, unstimulated control, replicate 2
BioProject PRJNA639269
SRA SRP267172

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Supplementary file Size Download File type/resource
GSE152414_Hs578T_RNAsequence.fpkm_tracking.gz 1.4 Mb (ftp)(http) FPKM_TRACKING
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Raw data are available in SRA
Processed data are available on Series record

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