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Series GSE152331 Query DataSets for GSE152331
Status Public on Jun 13, 2020
Title Gene expression profile of TPT1 gene knock downed human ES-NSC
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To evaluate the function of TPT1 in human ES-derived neural stem cells (ES-NSCs), we knock downed TPT1 gene expression based on the lentivirus system expressing shTPT1 RNA with control. We isolated RNA from ES-NSCs 2 days after infection and subjected to RNA-seq analysis. In silico data analysis supported the function of TPT1 related to cell cycle regulation, consistent with in vitro experimental results.
Overall design Examination of gene expression profile of TPT1 gene knock downed human ES-NSC
Contributor(s) Ohta S
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Submission date Jun 12, 2020
Last update date Jun 15, 2020
Contact name Shigeki Ohta
Organization name Keio University
Street address 35
City Shinanomachi,Shinjukuku
State/province Tokyo
ZIP/Postal code 1658582
Country Japan
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (2)
GSM4613112 IonXpress_014_rawlib
GSM4613113 IonXpress_015_rawlib
BioProject PRJNA639041
SRA SRP267033

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Supplementary file Size Download File type/resource
GSE152331_ampliSeqRNA_RPM.DE.IonXpress_015-IonXpress_014.txt.gz 913.4 Kb (ftp)(http) TXT
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