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Series GSE152165 Query DataSets for GSE152165
Status Public on Jun 10, 2020
Title Rapamycin and dexamethasone during pregnancy prevents tuberous sclerosis complex associated cystic kidney disease
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Chronic kidney disease is the main cause of mortality in patients with tuberous sclerosis complex disease (TSC). The mechanisms underlying TSC cystic kidney disease remain unclear with no available interventions to prevent cyst formation. Using targeted deletion of TSC1 in nephron progenitor cells, we showed that cysts in TSC1 null embryonic kidneys originate from injured proximal tubular cells with high mTOR complex 1 activity. Injection of rapamycin to pregnant mice inhibited the mTOR pathway and tubular cell proliferation in kidneys of TSC1 null offspring. Rapamycin also prevented renal cystogenesis and prolonged the life span of TSC newborns. Gene expression analysis of proximal tubule cells, identified sets of genes and pathways that were modified secondary to TSC1 deletion and rescued by rapamycin administration during nephrogenesis. Inflammation with mononuclear infiltration was observed in the cystic areas of TSC1 null kidneys. Dexamethasone administration during pregnancy decreased cyst formation not only by inhibiting the inflammatory response but also by interfering with the mTORC1 pathway. These results reveal novel mechanisms of cystogenesis in TSC disease and suggest new interventions prior to birth to ameliorate cystic disease in offspring.
 
Overall design RNA expression profile of proximal tubule cells extracted at E18.5 from WT, Six2 Cre Tsc1 Fl/Fl and Six2 Cre Tsc1 Fl/Fl mice subjected to Rapamycin treatment during embryogenesis. Each condition had three replicates.
 
Contributor(s) Volovelsky O, Nechama M
Citation(s) 32484794
Submission date Jun 10, 2020
Last update date Sep 09, 2020
Contact name Morris Nechama
E-mail(s) Moris.Nehama@mail.huji.ac.il
Phone +972586328141
Organization name Hadassah Hebrew University Medical Center
Department Pediatric
Lab Pediatric Nephrology
Street address Hadassah Medical Center, Ein Karem
City Jerusalem
State/province Israel
ZIP/Postal code 91120
Country Israel
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (9)
GSM4605289 Wild type proximal tubule cells repeat1
GSM4605290 Wild type proximal tubule cells repeat2
GSM4605291 Wild type proximal tubule cells repeat3
Relations
BioProject PRJNA638537
SRA SRP266734

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Supplementary file Size Download File type/resource
GSE152165_DESeq2_Results.xlsx 21.4 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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