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GEO accession:
Series GSE150907
Query DataSets for GSE150907
Status
Public on May 13, 2022
Title
Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Other
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
35617427
Submission date
May 20, 2020
Last update date
Feb 21, 2023
Contact name
Howard Y Chang
E-mail(s)
howchang@stanford.edu
Phone
650-725-7022
Organization name
Stanford University
Department
Center for Personal Dynamic Regulomes
Lab
Howard Y. Chang
Street address
CCSR 2130, 269 Campus Drive
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platforms (3)
GPL15520
Illumina MiSeq (Homo sapiens)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (32)
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GSM4560464
iPSC_WT_NKX2_4C
GSM4560465
iPSC_MUT_NKX2_4C
GSM4560466
iPSC_WT_PAX9_4C
GSM4560467
iPSC_MUT_PAX9_4C
GSM4560468
iPSC_WT_TBX3_4C
GSM4560469
iPSC_MUT_TBX3_4C
GSM4560470
mESC_Hmx1Del_H3K27me3_CutTag_rep1
GSM4560471
mESC_Hmx1Del_H3K27me3_CutTag_rep2
GSM4560472
mESC_HoxaDel_H3K27me3_CutTag_rep1
GSM4560473
mESC_HoxaDel_H3K27me3_CutTag_rep2
GSM4560474
mESC_HoxaDel_H3K27me3_CutTag_rep3
GSM4560475
mESC_Wnt6Del_H3K27me3_CutTag_rep1
GSM4560476
mESC_Wnt6Del_H3K27me3_CutTag_rep2
GSM4560477
mESC_Hmx1Del_IgG_CutTag_rep1
GSM4560478
mESC_Hmx1Del_IgG_CutTag_rep2
GSM4560479
mESC_HoxaDel_IgG_CutTag_rep1
GSM4560480
mESC_HoxaDel_IgG_CutTag_rep2
GSM4560481
mESC_HoxaDel_IgG_CutTag_rep3
GSM4560482
mESC_Wnt6Del_IgG_CutTag_rep1
GSM4560483
mESC_Wnt6Del_IgG_CutTag_rep2
GSM4560484
mESC_H3K27me3_HiChIP
GSM4560485
mESC_H3K27ac_HiChIP
GSM4560486
iPSC_WT_A_H3K27me3_HiChIP
GSM4560487
iPSC_WT_B_H3K27me3_HiChIP
GSM4560488
iPSC_MUT_A_H3K27me3_HiChIP
GSM4560489
iPSC_MUT_B_H3K27me3_HiChIP
GSM5888599
mESC_WT_RNA_rep1
GSM5888600
mESC_WT_RNA_rep2
GSM5888601
mESC_Wnt6_het_del_RNA_rep1
GSM5888602
mESC_Wnt6_het_del_RNA_rep2
GSM5888603
mESC_Wnt6_homo_del_RNA_rep1
GSM5888604
mESC_Wnt6_homo_del_RNA_rep2
This SuperSeries is composed of the following SubSeries:
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GSE150904
Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation [4C-seq]
GSE150905
Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation [Cut&Tag]
GSE150906
Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation [HiChIP]
GSE196526
Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation [RNA-Seq]
Relations
BioProject
PRJNA634024
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE150907_RAW.tar
2.9 Gb
(http)
(custom)
TAR (of BW, HIC)
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