|
| Status |
Public on May 19, 2020 |
| Title |
Transcriptome profiling of Brassica rapa subsp. pekinensis treated with immunity elicitors |
| Organism |
Brassica rapa |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Plant leaf discs were treated with plant immunity elicitors (chitin or flg22) or water for 30 or 180 minutes
|
| |
|
| Overall design |
Leaf discs from 17-day-old B. rapa plants grown on soil in short day conditions were treated with water or water solution of chitin (100µg/mL) or flg22 (100nM) for 30 or 180 minutes. mRNA expression profiles were generated in three biological replicates. Sequencing was performed with Illumina NovaSeq 6000 sequencing platform.
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| |
|
| Contributor(s) |
Segonzac C, Kim W, Prokchorchik M |
| Citation(s) |
33328480 |
| |
| Submission date |
May 18, 2020 |
| Last update date |
Jan 04, 2021 |
| Contact name |
Cecile Segonzac |
| E-mail(s) |
csegonzac@snu.ac.kr
|
| Organization name |
Seoul National University
|
| Department |
Department of Plant Science
|
| Lab |
Horticultural Crop Molecular Physiology Lab
|
| Street address |
1 Gwanak-ro, Gwanak-gu
|
| City |
Seoul |
| ZIP/Postal code |
08826 |
| Country |
South Korea |
| |
|
| Platforms (1) |
| GPL28300 |
Illumina NovaSeq 6000 (Brassica rapa) |
|
| Samples (23)
|
|
| Relations |
| BioProject |
PRJNA633493 |
| SRA |
SRP262130 |
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