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Series GSE150102 Query DataSets for GSE150102
Status Public on Jan 26, 2022
Title Effect of leptin deficiency in Bmal1 knockout mice across different tissues
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Obesity and liver diseases are associated with the disruption of the circadian clock that orchestrates mammalian physiology to optimize nutrient metabolism and storage. We show here that the activity of the circadian clock regulator BMAL1 is perturbed during liver fibrosis in humans. To understand the impact of BMAL1 perturbation in obesity and liver diseases, we assessed the impact of a high fat diet or leptin deficiency on Bmal1 knockout mice. While Bmal1 knockout mice were prone to obesity, they were protected against insulin resistance, hepatic steatosis, inflammation, and fibrosis. In addition to direct transcriptional regulation of metabolic programs by BMAL1, we show that adaptation disruption of the growth hormone and sex hormone pathways plays a critical role in this protection. Similar endocrine perturbations correlate with the development of liver fibrosis in humans, but were absent in hepatocyte specific Bmal1 knockout mice. This suggestsing that systemic endocrine perturbation associated with circadian disruptionthe disruption of BMAL1 activity is critical for the pathogenesis of metabolic and liver diseases.
 
Overall design RNA-Seq from mRNA of mouse liver, sceletal muscle and epididymal white adipose tissue in mice with different genotypes including ob/ob Bmal1 WT, ob/ob Bmal1 KO, wt/wt Bmal1 WT and wt/wt Bmal1 KO.
 
Contributor(s) Jouffe C, Weger BD, Martin E, Gobet C, Charpagne A, Morin-Rivron D, Masoodi M, Uhlenhaut NH,  Gachon F
Citation(s) 35238641
Submission date May 08, 2020
Last update date Jul 12, 2022
Contact name Benjamin D Weger
Organization name EPFL
Department SV
Lab Naef Lab
Street address Station 15
City Lausanne
State/province VD
ZIP/Postal code 76344
Country Germany
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (68)
GSM4523579 Sample_BmalWT_wt_17_WAT_ZT12
GSM4523580 Sample_BmalWT_wt_19_WAT_ZT12
GSM4523581 Sample_BmalWT_wt_373_WAT_ZT12
This SubSeries is part of SuperSeries:
GSE193184 Disruption of the circadian clock component BMAL1 elicits an endocrine adaption impacting on insulin sensitivity and liver disease.
Relations
BioProject PRJNA631168
SRA SRP260650

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Supplementary file Size Download File type/resource
GSE150102_counts_v2.txt.gz 2.5 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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