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Series GSE149239 Query DataSets for GSE149239
Status Public on Apr 24, 2020
Title Lupus milieu favors the conversion of self-reactive CD8 T cells to IL-17 producing double negative T cells
Organism Mus musculus
Experiment type Other
Summary Mature double negative (DN) T cells are αβ T cells lacking CD4/CD8 coreceptors and expanded in patients with systemic lupus erythematosus (SLE). It is not known whether they display a narrow or expander TCR repertoire.
 
Overall design Examination of TCR repertoire of CD4, CD8 and DN T cells from lupus prone MRL/lpr mouse
 
Contributor(s) Tsokos GC, Li H
Citation(s) 32503973
Submission date Apr 23, 2020
Last update date Jun 22, 2020
Contact name George C Tsokos
E-mail(s) gtsokos@bidmc.harvard.edu
Phone (617) 632-8658
Organization name Harvard Medical School
Department Rheumatology/BIDMC
Street address CLS-928, 3 Blackfan Circle
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (3)
GSM4494767 CD4 T cells
GSM4494768 CD8 T cells
GSM4494769 DN T cells
Relations
BioProject PRJNA627722
SRA SRP258153

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149239_RAW.tar 2.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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