|
| Status |
Public on Oct 02, 2009 |
| Title |
SNP/CNV analysis in a breast cancer metastasis model |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
|
| Summary |
The Affymetrix SNP/CNV (SNP 6.0) platform was used to analyze a cell line model of lymph node metastasis comprised of a poorly metastatic MDA-MB-468GFP human breast adenocarcinoma cell line and its highly metastatic variant (468LN).
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| |
|
| Overall design |
DNA derived from 2 biological replicates of a highly metastatic (via lymph nodes) breast cancer cell line (468GFP-LN) was compared to 2 biological replicates of DNA prepared from the parental cell line, 468GFP.
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| |
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| Contributor(s) |
Rodenhiser DI, Andrews J, Kennette W, Pilon J, Hodgson A, Tuck AB, Chambers AF |
| Citation(s) |
20084286 |
| |
| Submission date |
Feb 17, 2009 |
| Last update date |
Nov 27, 2018 |
| Contact name |
Ann Chambers |
| E-mail(s) |
joseph.andrews@lhsc.on.ca
|
| Phone |
(519) 685-8430
|
| Organization name |
London Regional Cancer program
|
| Department |
Victoria research labs
|
| Street address |
790 Commissioner's Road E
|
| City |
London |
| State/province |
Ontario |
| ZIP/Postal code |
N6A 4L6 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
|
| Samples (4)
|
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| This SubSeries is part of SuperSeries: |
| GSE15619 |
Epigenetic signature of breast cancer and its association with gene expression and copy number |
|
| Relations |
| BioProject |
PRJNA123195 |
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