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Series GSE148518 Query DataSets for GSE148518
Status Public on Apr 03, 2023
Title TBBPA, TBBPS and TCBPA disrupt hESCs hepatic differentiation and promote the proliferation of differentiated cells seemingly via up-regulating the FGF10 signaling pathway
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Halogenated flame retardants (HFRs) Tetrabromobisphenol A (TBBPA), Tetrabromobisphenol S (TBBPS) and Tetrachlorobisphenol (TCBPA) are wildly applied in manufacturing industry to improve the fire safety of the products. Recent reports demonstrated that TBBPA, TBBPS and TCBPA can be detected in pregnant women serum at nanomolar-level. Considering TBBPA have also been detected in the cord serum and the structural similarity of the 3 HFRs, it is necessary to pay attention to their development toxicity. Liver is the important detoxic organ but also target of TBBPA since it has been demonstrated that TBBPA exposure lead to increased liver weight in mouse and rat. So the developmental hepatic toxicity of the 3 HFRs were studied in this current research with the transcriptomic and human embryonic stem cells hepatic differentiation based toxicity evaluation system. A hepatic differentiation specific lineage development map and cell lineage - gene expression annotations were made and used for easily assessing the lineage alternations caused by toxicant treatment. Together with GO and KEGG analysis, this study mainly demonstrated that, the 3 HFRs have many common disruptive effect on hepatic differentiation, while only TCBPA significantly inhibited hepatic differentiation. The up-regulation of genes related to cell cycle and FGF10 signaling pathway at relatively late stage of hepatic differentiation indicates the proliferation of hepatoblasts were promoted by the 3 HFRs, likely via up-regulating the FGF10 signaling pathway. The proliferating promoting effect may partly explain why liver gain weight in rodents exposed to TBBPA.
 
Overall design A total of 24 samples analyzed, with 2 H9 samples here, 16 samples in our unpublished research (GSM3712591-GSM3712606 in GSE129412 and GSM4473072-GSM4473087 here), and 6 samples (GSM3518767-GSM3518772) from our previously published research.
 
Contributor(s) Yang R, Liang S, Liu S, Liang X, Jiang L, Yin N, Faiola F
Citation(s) 32653787
Submission date Apr 12, 2020
Last update date Jul 03, 2023
Contact name Renjun Yang
E-mail(s) rjyang@rcees.ac.cn
Phone 18811781909
Organization name RCEES
Street address 双清路18号林业大学北门
City 北京市
State/province 北京
ZIP/Postal code 100085
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (18)
GSM4473070 H9-1
GSM4473071 H9-2
GSM4473072 hHEP_day 4_Ctrl-1
Relations
BioProject PRJNA624865
SRA SRP256239

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE148518_Expected_count_of_genes.txt.gz 773.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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