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Series GSE147354 Query DataSets for GSE147354
Status Public on Apr 13, 2020
Title Defects in mTORC1 Network and mTORC1-STAT3 Pathway Crosstalk Contributes to Noninflammatory Hepatocellular Carcinoma
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary mTORC1-driven noninflammatory HCC and provide insight into further development of a protective strategy against noninflammatory HCC.
Background & Aims: Mammalian target of rapamycin complex 1 (mTORC1) is frequently hyperactivated in hepatocellular carcinoma (HCC). Cases of HCC without inflammation and cirrhosis are not rarely seen in clinics. However, the molecular basis of noninflammatory HCC remains unclear.
Methods: Spontaneous noninflammatory HCC in mice was triggered by constitutive elevation of mTORC1 by liver-specific Tsc1 knockout (LTsc1KO). A multi-omics approach was utilized on tumor tissues to better understand the molecular basis for the development of HCC in the LTsc1KO model.
Results: We showed that LTsc1KO in mice triggered spontaneous noninflammatory HCC, with molecular characteristics similar to those of diethylnitrosamine-mediated noncirrhotic HCC. Mitochondrial and autophagy defects, as well as hepatic metabolic disorder were manifested in HCC development by LTsc1KO. mTORC1 activation on its own regulated an oncogenic network (DNA-damage-inducible transcript 4, nuclear protein 1 and fibroblast growth factor 21), and mTORC1–signal transducer and activator of transcription pathway crosstalk that altered specific metabolic pathways contributed to the development of noninflammatory HCC.
Conclusion: Our findings reveal the mechanisms of mTORC1-driven noninflammatory HCC and provide insight into further development of a protective strategy against noninflammatory HCC.
 
Overall design Spontaneous noninflammatory HCC in mice was triggered by constitutive elevation of mTORC1 by liver-specific Tsc1 knockout (LTsc1KO). A multi-omics approach was utilized on tumor tissues to better understand the molecular basis for the development of HCC in the LTsc1KO model.
 
Contributor(s) Li T, Gao Y
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Submission date Mar 22, 2020
Last update date Apr 15, 2020
Contact name Ting Li
E-mail(s) harazawarui520lt@sina.com
Phone +86 15013097752
Organization name Southern Medical University
Department Department of Hepatobiliary Surgery II, Zhujiang Hospital
Lab Institute of Regenerative Medicine
Street address 253 Gongye Street
City Guangzhou
State/province Guangdong
ZIP/Postal code 510280
Country China
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM4426629 WT 288
GSM4426630 LTsc1KO 287
Relations
BioProject PRJNA613942
SRA SRP253644

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Supplementary file Size Download File type/resource
GSE147354_RAW.tar 1.3 Mb (http)(custom) TAR (of XLS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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