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Series GSE147227 Query DataSets for GSE147227
Status Public on Aug 01, 2020
Title Effect of Particulate Matter (PM10) on innate immunity upon H5N1 infection
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Comparative transcriptomic analysis of A549 cell after H5N1 infection alone and H5N1 infection with PM10 exposure respectively
 
Overall design We exposed cells with PM10 and infected with H5N1 virus in one group of cells and in other group of cells were infected with H5N1 virus alone, total RNA was isolated and whole transcriptomic sequencing was done.
 
Contributor(s) Mishra R, Kumar H
Citation(s) 32771845
Submission date Mar 19, 2020
Last update date Sep 08, 2020
Contact name Himanshu Kumar
E-mail(s) hkumar@iiserb.ac.in
Organization name IISER Bhopal
Department Biological Sciences
Lab 215
Street address Indore bypass road
City Bhopal
State/province MADHYA PRADESH
ZIP/Postal code 462066
Country India
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM4421217 H5N1_1
GSM4421218 H5N1_2
GSM4421219 H5N1_PM10_1
Relations
BioProject PRJNA613460
SRA SRP253348

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147227_RAW.tar 770.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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