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Series GSE146680 Query DataSets for GSE146680
Status Public on Mar 10, 2020
Title Gasdermin-D-dependent IL-1 alpha release from microglia promotes protective immunity during chronic Toxoplasma gondii infection
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq experiment on FACS-sorted microglial and macrophage cell populations (infected with T. gondii type II strain Me49)
Overall design mRNA profiles of microglia and macrophages were generated using an Illumina MiSeq

Sequencing performed at UVa Genome Analysis & Technology Core,
Office of Research Core Administration.
University of Virginia Health System,
P.O. Box 800741,
Charlottesville, VA 22908-0741
Contributor(s) Harris T, Batista SJ, Johanson DM
Citation(s) 32703941, 36067217
Submission date Mar 09, 2020
Last update date Sep 27, 2022
Contact name Tajie Harris
Organization name University of Virginia
Street address 409 Lane Rd
City Charlottesville
ZIP/Postal code 22903
Country USA
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (8)
GSM4404009 Microglia from Toxoplasma gondii-infected mice 1
GSM4404010 Microglia from Toxoplasma gondii-infected mice 2
GSM4404011 Microglia from Toxoplasma gondii-infected mice 3
BioProject PRJNA611613
SRA SRP252107

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146680_RAW.tar 35.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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