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Series GSE146086 Query DataSets for GSE146086
Status Public on Nov 15, 2021
Title Intestinal epithelial GR in response to DEX treatment
Organism Mus musculus
Experiment type Expression profiling by array
Summary The goal of this project is to investigate the role of glucocorticoids and their receptor, glucocorticoid receptor (GR) , in intestinal stress response and tissue homeostasis.We generated a mouse model with specific deletion of GR in intestinal epithelium (GR iKO mice) and examined colonic transcriptomes of adrenalectomized (ADX) Flox control and GR iKO mice in response to dexamethasone (DEX) treatment by microarray analysis.
 
Overall design Total RNA were extracted from colon tissues of 4 pairs adrenalectomized (ADX) Flox control and GR iKO mice treated with or without 1 mg/Kg dexamethasone (DEX) for 6 hours. Gene expression profiles were analyzed using Agilent Whole Mouse Genome 4x44 multiplex format oligo arrays (014868) (Agilent Technologies, Santa Clara, CA), following the Agilent 1-color microarray-based gene expression analysis protocol.
 
Contributor(s) Li X, Tang S
Citation(s) 34784298
Submission date Feb 28, 2020
Last update date Nov 18, 2021
Contact name Jian-Liang Li
Organization name NIEHS
Street address 111 TW Alexander Dr
City Durham
State/province NC
ZIP/Postal code 27709
Country USA
 
Platforms (1)
GPL4134 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version)
Samples (14)
GSM4364433 Flox_DEX Replicate 1
GSM4364434 Flox_DEX Replicate 2
GSM4364435 Flox_DEX Replicate 4
Relations
BioProject PRJNA609257

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146086.txt.gz 2.1 Mb (ftp)(http) TXT
GSE146086_RAW.tar 37.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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