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Series GSE146013 Query DataSets for GSE146013
Status Public on Jun 17, 2020
Title MicroRNA alterations in a mouse model of prion disease
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary MicroRNA alterations were investigated in a Tg501 mouse model of prion disases that express the goat prion protein (PRNP). Age-matched Tg501 mice without inoculation (controls) and intracranially inoculated with caprine scrapie strain were compared in presymptomatic and symptomatic stages.
 
Overall design Small RNA profiles from cervical spinal cord of prion-inoculated (n=11) and non-inoculated (n=13), age-matched Tg501 mice were generated at symptomatic (n=12) and presymptomatic (n=12) stage using HiSeq v4 chemistry on Illumina HiSeq 2500.
 
Contributor(s) Toivonen JM, Martin Burriel I
Citation(s) 32549330
Submission date Feb 26, 2020
Last update date Sep 16, 2020
Contact name Janne M Toivonen
E-mail(s) toivonen@unizar.es
Organization name Universidad de Zaragoza
Department Departamento de Anatomía, Embriología y Genética Animal
Lab Laboratorio de Genética Bioquímica (LAGENBIO-I3A)
Street address Miguel servet 177
City Zaragoza
ZIP/Postal code 50013
Country Spain
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (24)
GSM4351989 CC1_16214_AGTCAA
GSM4351990 CC2_16214_AGTTCC
GSM4351991 CC3_16214_ATGTCA
Relations
BioProject PRJNA608972
SRA SRP250875

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146013_normalized_counts_chimira.txt.gz 41.8 Kb (ftp)(http) TXT
GSE146013_raw_counts_chimira.txt.gz 42.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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