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Series GSE146012 Query DataSets for GSE146012
Status Public on Mar 23, 2020
Title Gene expression of primary tumor and lung metastases in 4T1 mouse mammry tumor model
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We sorted GFP-labeled 4T1 cells from primary tumor and lung metastases and performed mRNA sequencing.
 
Overall design Identify differentially expressed genes between primary tumor and lung metastases
 
Contributor(s) So JY, Yang L
Citation(s) 32265226
Submission date Feb 26, 2020
Last update date Jun 24, 2020
Contact name Jae Young So
Organization name NCI/NIH
Department LCBG
Street address 37 Convent Drive, Rm 3134
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM4351981 RNAseq-4T1-Tumor-1
GSM4351982 RNAseq-4T1-Tumor-2
GSM4351983 RNAseq-4T1-MFP-Met-1
Relations
BioProject PRJNA608973
SRA SRP250874

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146012_DEG_MFPmet_vs_Tumor.txt.gz 1.2 Mb (ftp)(http) TXT
GSE146012_DEG_TVImet_vs_Tumor.txt.gz 1.2 Mb (ftp)(http) TXT
GSE146012_RNA_seq_logtransformed_count.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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