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Series GSE145973 Query DataSets for GSE145973
Status Public on May 18, 2020
Title Single-cell RNA-sequencing of CD45+ cells isolated from mouse dura mater or brain after photothrombotic injury
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To further elucidate molecular differences in immune cells and identify potential sources of Vegfa in response to photothrombotic injury, we performed single-cell RNA-sequencing of CD45+ cells isolated from the mouse dura mater or brain after photothrombotic injury.
 
Overall design 3 days after photothrombotic injury on 8-week-old mice, CD45+ cells of the dura mater or brain were isolated by FACS and subjected to single-cell RNA-sequencing using the 10X Chromium system.
 
Contributor(s) Koh BI
Citation(s) 32737287
Submission date Feb 26, 2020
Last update date Aug 18, 2020
Contact name Bong Ihn Koh
Organization name Korea Advanced Institute of Science and Technology
Street address 291 Daehakro
City Daejeon
ZIP/Postal code 34141
Country South Korea
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM4340488 CT_brain_CD45pos
GSM4340489 CT_dura_CD45pos
GSM4340490 INJ_brain_CD45pos
Relations
BioProject PRJNA608896
SRA SRP250815

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145973_RAW.tar 470.8 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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