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Series GSE14580 Query DataSets for GSE14580
Status Public on Jan 07, 2010
Title Mucosal gene signatures to predict response to infliximab in patients with ulcerative colitis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Infliximab, an anti-TNF-alpha monoclonal antibody, is an effective treatment for ulcerative colitis (UC) with over 60% of patients responding to treatment and up to 30% reaching remission. The mechanism of resistance to anti-TNF-alpha is unknown. This study used colonic mucosal gene expression to provide a predictive response signature for infliximab treatment in UC.

Keywords: drug response
 
Overall design Twenty-four patients with active UC, refractory to corticosteroids and/or immunosuppression, underwent colonoscopy with biopsies from diseased colon within a week prior to the first intravenous infusion of 5 mg infliximab per kg body weight. Response to infliximab was defined as endoscopic and histologic healing at 4-6 weeks after first infliximab treatment. Six control patients with normal colonoscopy were included. Total RNA was isolated from colonic mucosal biopsies, labelled and hybridized to Affymetrix Human Genome U133 Plus 2.0 Arrays.
 
Contributor(s) Arijs I, Van Lommel L, Van Steen K, De Hertogh G, Geboes K, Schuit F, Rutgeerts P
Citation(s) 19700435
Submission date Jan 26, 2009
Last update date Mar 25, 2019
Contact name Ingrid Arijs
E-mail(s) ingrid.arijs@med.kuleuven.be
Organization name KULeuven
Department Clinical and Experimental Medicine
Lab TARGID - IBD Leuven
Street address Herestraat 49
City Leuven
ZIP/Postal code 3000
Country Belgium
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (30)
GSM364627 CO1
GSM364628 CO2
GSM364629 CO3
Relations
BioProject PRJNA111695

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE14580_RAW.tar 131.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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