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Series GSE145383 Query DataSets for GSE145383
Status Public on Feb 18, 2020
Title The role of acid adaptation on transcriptome of breast cancer MCF7 cell line
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Acid adaptation is a prominent event in solid tumor evolution and progression. Using RNA sequencing we studied the effect of acid adaptation on breast cancer cell line (MCF7)
 
Overall design RNA profile of MCF7 breast cancer cell line was compared to acid adapted MCF7 cells
 
Contributor(s) Damaghi M
Citation(s) 32211331
Submission date Feb 17, 2020
Last update date May 24, 2020
Contact name Mehdi Damaghi
E-mail(s) MEHDI.DAMAGHI@MOFFITT.ORG
Phone 8136101966
Organization name Moffitt Cancer Center
Street address 12906 magnolia dr
City Tampa
State/province Fl
ZIP/Postal code 33612
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM4317569 001-B_RNA_Gillies_CICPT_175-49181183
GSM4317570 002-B_RNA_Gillies_CICPT_175-49180182
GSM4317571 003-B_RNA_Gillies_CICPT_175-49177173
Relations
BioProject PRJNA607042
SRA SRP249699

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145383_RAW.tar 1.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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