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Series GSE145288 Query DataSets for GSE145288
Status Public on Apr 21, 2020
Title Transcriptomes of small intestinal WT and Tph1-deficient ILC2s
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA sequencing of small intestinal ILC2s sorted from Il7rCre/+ Tph1flox/flox or Il7rCre/+ control mice at steady state
 
Overall design ILC2s were sort-purified (Lin- CD45+ CD127+ KLRG1+) from the lamina propria of the small intestine of of naïve Il7rCre/+ Tph1fl/fl and Il7rCre/+ mice at steady state. (Il7rCre/+ n= 4 and Il7rCre/+ Tph1flox/flox n= 3).
 
Contributor(s) Flamar A, Artis D
Citation(s) 32160524
Submission date Feb 13, 2020
Last update date Apr 21, 2020
Contact name Gregory Putzel
Organization name NYU Langone Health
Department Microbiology
Lab Pironti
Street address 430 East 29th Street
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (7)
GSM4314280 IL7R_10
GSM4314281 IL7R_4
GSM4314282 IL7R_9_1
This SubSeries is part of SuperSeries:
GSE145289 Interleukin-33 induces the enzyme tryptophan hydroxylase 1 to promote inflammatory group 2 innate lymphoid cell-mediated immunity
Relations
BioProject PRJNA606605
SRA SRP249392

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145288_Tph1_SI-gene_counts.tsv.gz 307.2 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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