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Series GSE145232 Query DataSets for GSE145232
Status Public on Feb 14, 2020
Title High glucose levels increase influenza-associated damage to the pulmonary epithelial-endothelial barrier
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Here, the effects of high glucose levels on influenza severity were investigated using an in vitro model of the pulmonary epithelial-endothelial barrier. We show that compared to low glucose levels, high glucose conditions prior to influenza A virus infection increased virus-induced barrier damage. Increased barrier damage was not associated with increased cell death nor increased virus replication, but rather an increased pro-inflammatory response in endothelial cells and the subsequent damage of the epithelial junctional complex.
 
Overall design Human epithelial cells and human pulmonary microvascular endothelial cells were grown in a transwell system. Endothelial cells were exposed to either normoglycemic (7mM glucose) or hyperglycaemic conditions (12mM glucose). Cells were then infected with Influenza A Virus (or mock infection protocol for control) before performing RNA-Seq analysis.
 
Contributor(s) Short KR, Upton KR
Citation(s) 32697191
Submission date Feb 13, 2020
Last update date Aug 03, 2020
Contact name Kyle R Upton
E-mail(s) kyle.upton.is@gmail.com
Organization name University of Queensland
Department SCMB
Lab Upton
Street address Cooper Road
City Brisbane
State/province Qld
ZIP/Postal code 4067
Country Australia
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (16)
GSM4308709 7M_KB1
GSM4308710 7M_KB2
GSM4308711 7M_KB10
Relations
BioProject PRJNA606471
SRA SRP248940

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145232_RAW.tar 3.6 Mb (http)(custom) TAR (of TXT)
GSE145232_edgeR_12m_12v.csv.gz 427.5 Kb (ftp)(http) CSV
GSE145232_edgeR_7m_7v.csv.gz 431.5 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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