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Series GSE144561 Query DataSets for GSE144561
Status Public on Mar 01, 2020
Title Pancreatic Circulating Tumour Cell Profiling Identifies LIN28B as a Metastasis Driver and Drug Target
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression profiling of circulating tumor cells purified from human patients with pancreatic cancer led to identification of LIN28B as possible metastasis driver. Functional studies in model systems confirmed the importance of this pathway.
 
Overall design RNA-seq of primary purified circulating tumor cells from pancreatic cancer patients and healthy donors.
 
Contributor(s) Franses J, Ting D
Citation(s) 32620742
Submission date Jan 30, 2020
Last update date Jul 13, 2020
Contact name David T Ting
E-mail(s) dting1@partners.org
Phone 617-726-0337
Organization name Massachusetts General Hospital
Department Cancer Center
Lab Ting Lab
Street address 149 E 13th street
City Boston
State/province MA
ZIP/Postal code 02129
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (81)
GSM4290875 HD01
GSM4290876 HD02
GSM4290877 HD03
Relations
BioProject PRJNA604022
SRA SRP246180

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144561_DESeq2_NormalizedCountsForAllSamples.txt.gz 6.1 Mb (ftp)(http) TXT
GSE144561_rawCountsAllsamples.txt.gz 2.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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