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Series GSE144539 Query DataSets for GSE144539
Status Public on Oct 05, 2020
Title Ribosome profiling and RNA-seq of Tsc2+/- hippocampal slices
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary Tuberous sclerosis (TSC) is caused by loss of function in Tsc2 and haploinsufficiency of the protein product tuberin.
 
Overall design Ribosome profiling and RNA-seq of hippocampal slices from WT and littermate Tsc2+/- mice before and after DHPG-mGluR stimulation
 
Contributor(s) Hien A, Molinaro G, Liu B, Huber KM, Richter JD
Citation(s) 33054857
Submission date Jan 30, 2020
Last update date Jan 04, 2021
Contact name Annie Hien
E-mail(s) annie.hien@umassmed.edu
Organization name UMass Medical School Worcester
Department Molecular Medicine
Lab Richter Lab
Street address 373 Plantation Street
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (24)
GSM4290333 tsc_bas_rpf_rep1
GSM4290334 tsc_bas_rpf_rep2
GSM4290335 tsc_bas_rpf_rep3
Relations
BioProject PRJNA603987
SRA SRP246149

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144539_ca1.rep1-3.ribo.rsem.gene.summary.counts.txt.gz 368.0 Kb (ftp)(http) TXT
GSE144539_ca1.rep1-3.rna.rsem.gene.summary.counts.txt.gz 460.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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