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Series GSE144462 Query DataSets for GSE144462
Status Public on Mar 03, 2021
Title Heterogeneity of the human glial progenitor cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Glial cells distribute extensively in the brain and execute important functions. However, their developmental process and molecular features are still not fully explored in human, especially for fetal astrocytes. It is known that EGFR is involved in glial development and we found that the emergence of EGFR+ cells are near the start of gliogenesis and majority of those co-expressed SOX2 during human cerebral cortex development at midgestation. We performed single-cell RNA sequencing of thousands of EGFR+ cells in the human fetal brain cortex from GW21 to GW26. Compared with other published brain sequencing data, our dataset highly enriched the progenitor cells and glial cells. Multiple molecularly specific populations were identified.
 
Overall design We performed single-cell RNA sequencing on EGFR+ cells isolated from the frontal lobe of the human cerebral cortex from GW21 to GW26 to investigate the molecular features of progenitors, especially for glial cells.

*Raw data are not provided due to China's regulations on the management of human genetic resources.*
 
Contributor(s) Fu Y
Citation(s) 33657375
Submission date Jan 29, 2020
Last update date Feb 17, 2022
Contact name Yuanyuan Fu
Organization name BIOPIC, Peking University
Street address 5 Yiheyuan Road
City Beijing
ZIP/Postal code 100871
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (41)
GSM4288685 GW21E1_smRNA_Day0_1
GSM4288686 GW21E2_smRNA_Day0_1
GSM4288687 GW21E3_smRNA_Day0_2
Relations
BioProject PRJNA603742
SRA SRP245852
SRA SRP301873

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144462_Fetal_brain_progenitors_UMIs.txt.gz 14.9 Mb (ftp)(http) TXT
GSE144462_barcode_info.txt.gz 613 b (ftp)(http) TXT
GSE144462_cell_detail_info.txt.gz 550 b (ftp)(http) TXT
GSE144462_cell_type_annotation.txt.gz 34.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Processed data are available on Series record
Raw data not provided for this record

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