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Series GSE144215 Query DataSets for GSE144215
Status Public on Feb 02, 2021
Title Drosera rotundifolia induces gene expression changes in human bronchial epithelial cells 16HBE
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary 16HBE cells were incubated for 3 or 6h with a homeopathic preparation of Drosera r. or the solvent control and the transcriptome was analyzed by RNA sequencing. The expression changes of the main statistically significant genes were validated through follow-up experiments using RT-qPCR.
Compared with the control solution, Drosera r. changed the expression of dozens of genes already after 3h and this effect was amplified after 6 hours of treatment. The main target genes were some ligands of epithelial growth factor receptor (EREG, AREG, EPGN), genes involved in xenobiotic detoxification (CYP1B1, TIPARP) and chemokines. The network of the main biological functions included epithelial cell proliferation, regulation of angiogenesis, cell chemotaxis, and wound healing.
Drosera r. acts on a complex and faceted set of genes, potentially involved in different layers of the bronchial mucosa. The global effect of the plant in 16HBE epithelial cells is a mild stress response that primes the epithelial reparative process and recruits the innate cell defense.
 
Overall design Evaluation of differential expressed genes by 16HBE cells upon Drosera 3x treatment
 
Contributor(s) Arruda-Silva F, Bellavite P, Marzotto M
Citation(s) 33504888
Submission date Jan 24, 2020
Last update date Feb 02, 2021
Contact name Fabio Arruda-Silva
E-mail(s) fabio.arrudaesilva@univr.it
Organization name University of Verona
Department Department of Medicine
Street address strada Le Grazie, 8
City Verona
State/province VR
ZIP/Postal code 37135
Country Italy
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (16)
GSM4282901 ctrl1_6h
GSM4282902 ctrl2_6h
GSM4282903 ctrl3_6h
Relations
BioProject PRJNA603072
SRA SRP244657

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144215_res_TPM_3h.xlsx 3.8 Mb (ftp)(http) XLSX
GSE144215_res_TPM_6h.xlsx 5.3 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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