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Series GSE144080 Query DataSets for GSE144080
Status Public on Jan 23, 2020
Title Gene expression during recovery from different forms of trauma in the sea anemone, Nematostella vectensis
Organism Nematostella vectensis
Experiment type Expression profiling by high throughput sequencing
Summary We exposed N. vectensis to three forms of trauma (streptomycin, cytochalasin D, or calcium-free seawater) to determine differences in gene expression during recovery from the trauma. Gene expression was monitored during different time points of recovery for animals exposed to cytochalasin D or calcium-free seawater. Gene expression was monitored following designated times of exposure and after 1 hour of recovery for animals exposed to streptomycin.
 
Overall design total 84 samples: 14 time points (3 replicates each) for 2 conditions. (14*3*2 = 84)
 
Contributor(s) Menard-Harvey SS, Reitzel AM
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Submission date Jan 22, 2020
Last update date Jan 23, 2020
Contact name Whitney at Leach
Organization name University of North Carolina at Charlotte
Department Biological Sciences
Lab Reitzel
Street address 9201 University City Blvd.
City Charlotte
ZIP/Postal code 28223
Country USA
 
Platforms (1)
GPL23802 Illumina HiSeq 2500 (Nematostella vectensis)
Samples (84)
GSM4279282 CA-T0A_S87
GSM4279283 CA-T0B_S95
GSM4279284 CA-T0C_S103
Relations
BioProject PRJNA602703
SRA SRP243928

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144080_allcounts.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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