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GEO accession:
Series GSE143884
Query DataSets for GSE143884
Status
Public on Dec 31, 2020
Title
Transgenerational epigenetic and transcriptomic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in rat
Organism
Rattus norvegicus
Experiment type
Expression profiling by array
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Jan 17, 2020
Last update date
Jan 02, 2021
Contact name
Stephenie Prokopec
E-mail(s)
stephenie.prokopec@oicr.on.ca
Organization name
Ontario Institute for Cancer Research
Street address
661 University Avenue, Suite 510
City
Toronto
State/province
Ontario
ZIP/Postal code
M5G 0A3
Country
Canada
Platforms (2)
GPL20084
Illumina NextSeq 500 (Rattus norvegicus)
GPL26164
[RaGene-2_0-st] Affymetrix Rat Gene 2.0 ST Array [ragene20st_Rn_ENTREZG_21]
Samples (74)
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More...
GSM4257663
Male TCDD 100 ng/kg rep1
GSM4257664
Female TCDD 100 ng/kg rep1
GSM4257665
Male TCDD 30 ng/kg rep1
GSM4257666
Female TCDD 30 ng/kg rep1
GSM4257667
Male TCDD 100 ng/kg rep2
GSM4257668
Female TCDD 100 ng/kg rep2
GSM4257669
Male TCDD 300 ng/kg rep1
GSM4257670
Male TCDD 300 ng/kg rep2
GSM4257671
Female TCDD 300 ng/kg rep1
GSM4257672
Female TCDD 300 ng/kg rep2
GSM4257673
Male TCDD 300 ng/kg rep3
GSM4257674
Male TCDD 300 ng/kg rep4
GSM4257675
Female TCDD 300 ng/kg rep3
GSM4257676
Male TCDD 30 ng/kg rep2
GSM4257677
Female TCDD 30 ng/kg rep2
GSM4257678
Male TCDD 30 ng/kg rep3
GSM4257679
Female TCDD 30 ng/kg rep3
GSM4257680
Male TCDD 30 ng/kg rep4
GSM4257681
Female TCDD 30 ng/kg rep4
GSM4257682
Male CornOil rep1
GSM4257683
Female CornOil rep1
GSM4257684
Male TCDD 30 ng/kg rep5
GSM4257685
Female TCDD 30 ng/kg rep5
GSM4257686
Male TCDD 100 ng/kg rep3
GSM4257687
Female TCDD 100 ng/kg rep3
GSM4257688
Male TCDD 100 ng/kg rep4
GSM4257689
Female TCDD 100 ng/kg rep4
GSM4257690
Male CornOil rep2
GSM4257691
Female CornOil rep2
GSM4257692
Male TCDD 30 ng/kg rep6
GSM4257693
Male TCDD 30 ng/kg rep7
GSM4257694
Female TCDD 30 ng/kg rep6
GSM4257695
Female TCDD 30 ng/kg rep7
GSM4257696
Male CornOil rep3
GSM4257697
Female CornOil rep3
GSM4257698
Male CornOil rep4
GSM4257699
Female CornOil rep4
GSM4257700
Male TCDD 1000 ng/kg rep1
GSM4257701
Male TCDD 1000 ng/kg rep2
GSM4257702
Female TCDD 1000 ng/kg rep1
GSM4257703
Female TCDD 1000 ng/kg rep2
GSM4257704
Male TCDD 1000 ng/kg rep3
GSM4257705
Male TCDD 1000 ng/kg rep4
GSM4257706
Female TCDD 1000 ng/kg rep3
GSM4257707
Female TCDD 1000 ng/kg rep4
GSM4257708
Male CornOil rep5
GSM4257709
Female CornOil rep5
GSM4257710
Male TCDD 100 ng/kg rep5
GSM4257711
Female TCDD 100 ng/kg rep5
GSM4257712
Male TCDD 1000 ng/kg rep5
GSM4257713
Male TCDD 1000 ng/kg rep6
GSM4257714
Female TCDD 1000 ng/kg rep5
GSM4257715
Female TCDD 1000 ng/kg rep6
GSM4257716
Male TCDD 1000 ng/kg rep7
GSM4257717
Male TCDD 1000 ng/kg rep8
GSM4257718
Female TCDD 1000 ng/kg rep7
GSM4257719
Female TCDD 1000 ng/kg rep8
GSM4257720
Female CornOil rep6
GSM4257721
Male TCDD 30 ng/kg rep8
GSM4257722
Female TCDD 30 ng/kg rep8
GSM4257723
Male TCDD 100 ng/kg rep6
GSM4257724
Female TCDD 100 ng/kg rep6
GSM4257725
Male TCDD 300 ng/kg rep5
GSM4257726
Male TCDD 300 ng/kg rep6
GSM4257727
Female TCDD 300 ng/kg rep4
GSM4257728
Female TCDD 300 ng/kg rep5
GSM4276190
Male CornOil rep1 [Bisulfite-Seq]
GSM4276191
Male CornOil rep2 [Bisulfite-Seq]
GSM4276192
Male CornOil rep3 [Bisulfite-Seq]
GSM4276193
Male TCDD 1000 ng/kg rep1 [Bisulfite-Seq]
GSM4276194
Male TCDD 1000 ng/kg rep3 [Bisulfite-Seq]
GSM4276195
Male CornOil rep5 [Bisulfite-Seq]
GSM4276196
Male TCDD 1000 ng/kg rep5 [Bisulfite-Seq]
GSM4276197
Male TCDD 1000 ng/kg rep7 [Bisulfite-Seq]
This SuperSeries is composed of the following SubSeries:
GSE143368
Transgenerational epigenetic and transcriptomic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in rat [array]
GSE143883
Transgenerational epigenetic and transcriptomic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure in rat [Bisulfite-Seq]
Relations
BioProject
PRJNA601969
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE143884_RAW.tar
32.1 Gb
(http)
(custom)
TAR (of CEL, TXT)
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