|
| Status |
Public on Sep 27, 2021 |
| Title |
ATAC seq from EGFP+ and EGFP- cells from postnatal day 3 striatum from GENSAT Nr4a1-EGFP mice |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
EGFP+ and EGFP- cells were sorted from dissected striatum from PND3 GENSAT Nr4a1-EGFP mice.
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| Overall design |
In these mice, EGFP is expressed in the striatal striosome compartment, allowing for the identification of open chromatin regions in striosome and presumably matrix striatal compartments
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| Contributor(s) |
Fullard JF, Apontes P, Cirnaru M, Ehrlich M, Roussos P |
| Citation(s) |
34609283 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 NS100529 |
Identifying Factors Regulating Medium Spiny Neuron Differentiation or Maintenance as Therapeutic Targets for Huntington's Disease using Induced Pluripotent Stem Cells |
BUCK INSTITUTE FOR RESEARCH ON AGING |
Lisa M Ellerby |
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| |
| Submission date |
Jan 15, 2020 |
| Last update date |
Oct 08, 2021 |
| Contact name |
Panos Roussos |
| E-mail(s) |
panagiotis.roussos@mssm.edu
|
| Organization name |
Icahn School of Medicine at Mount Sinai
|
| Street address |
1470 Madison Ave
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10029 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA601456 |
| SRA |
SRP242073 |
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