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Series GSE143612 Query DataSets for GSE143612
Status Public on Jan 15, 2020
Title C/EBPα is crucial determinant of epithelial maintenance by preventing epithelial-to-mesenchymal transition
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-sequencing of human mammary epithelial cells (HMLEs) that were lentivirally transduced with vector that constitutively expresses C/EBPα and its respective empty vector control. Both lines were analyzed with and without TGF-β treatment.
 
Overall design RNA-sequencing of human mammary epithelial cells (HMLEs) engineered to express either pLZRS EV or pLZRS-C/EBPα with and without TGF-β (2.5ng/ml) for 24 hours.
Through RNA-sequencing we analysed the differentially TGF-β regulated genes that were also regulated by C/EBPα
 
Contributor(s) Roukens MG, Lourenço AR, Coffer PJ
Citation(s) 32034145
Submission date Jan 14, 2020
Last update date Apr 15, 2020
Contact name Ana Lourenço
E-mail(s) a.rita.lou@gmail.com, m.g.roukens-2@umcutrecht.nl
Organization name UMC Utrecht
Street address Uppsalalaan 8
City Utrecht
ZIP/Postal code 3584 CT
Country Netherlands
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM4263728 12TGFBminpLZRS
GSM4263729 13TGFBminpLZRS
GSM4263730 22TGFBpluspLZRS
Relations
BioProject PRJNA601109
SRA SRP241893

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE143612_CEBPATGFbdepgenes.txt.gz 69.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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