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Series GSE142986 Query DataSets for GSE142986
Status Public on Jan 04, 2020
Title Investigate the role of MLKL in regulating TNF-induced endothelial cell inflammatory response
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: Analyze the potential signaling pathways regulated by MLKL under TNF-induced endothelial cell inflammatory response
Methods: HUVECs were allowed to grow to confluency and were starved with basal medium containing 0.5% FBS for 6h. Then treat HUVECs with vehicle, NSA, TNF-alpha, TNF-alpha+NSA for 6h and extract RNA.
Results: NSA reduces the mRNA level of TNF-induced inflammation-related genes and most of these genes are downstream of NF-kappa B signaling pathway.
 
Overall design mRNA profiles of HUVECs treated with vehicle, NSA, TNF-alpha, TNF-alpha+NSA were generated by sequencing.
 
Contributor(s) Jialin D
Citation(s) 32332696
Submission date Jan 03, 2020
Last update date May 07, 2020
Contact name Dai Jialin
E-mail(s) daijialin@sioc.ac.cn
Phone 15021859671
Organization name Interdisciplinary Research Center of Biology and Chemistry
Street address Room 507-1, Build 6, QiuYue Rd 26, PuDong District
City Shanghai
State/province Shanghai
ZIP/Postal code 200000
Country China
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (12)
GSM4247461 DMSO-2
GSM4247462 DMSO-3
GSM4247463 DMSO-4
Relations
BioProject PRJNA598832
SRA SRP239386

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142986_gene_counts_featurecounts.xlsx 2.9 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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