|
| Status |
Public on Dec 27, 2019 |
| Title |
Effect of Th2 cytokines on AEC2 transcriptome |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the effect of exposure to IL13 or IL4 of alveolar epithelial type 2 cells (AEC2s) in organoid culture
|
| |
|
| Overall design |
Examination of transcriptome of AEC2s after exposure to IL13 or IL4 for 16 days in organoid culture (compared to untreated, cultured AEC2s and primary, non-cultured AEC2s)
|
| |
|
| Contributor(s) |
Barkauskas CE |
| Citation(s) |
31941839 |
| |
| Submission date |
Dec 26, 2019 |
| Last update date |
Mar 09, 2020 |
| Contact name |
Christina E Barkauskas |
| E-mail(s) |
barka001@mc.duke.edu
|
| Organization name |
Duke University
|
| Department |
Medicine / Pulmonary
|
| Street address |
BOX 2629 DUMC
|
| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27710 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (12)
|
| GSM4233170 |
Control organoid-expanded AEC2s 150k |
| GSM4233171 |
IL13-exposed organoid-expanded AEC2s 292k |
| GSM4233172 |
IL4-exposed organoid-expanded AEC2s 330k |
|
| Relations |
| BioProject |
PRJNA597774 |
| SRA |
SRP238846 |
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