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Series GSE142334 Query DataSets for GSE142334
Status Public on Dec 20, 2019
Title Gene expression profiling in follicular lymphoma (FL) samples and paired transformed follicular lymphoma (tFL) (n=6 samples)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Follicular lymphoma (FL) is the second most common forms of B cell lymphoma that result from the expansion of germinal center (GC) B cells. Here, we aimed to find differential expression of genes between patient samples isolated from indoent FL or transformed and aggressive FL.
 
Overall design Using RNA-seq we profiled human FL and paired tFL samples
 
Contributor(s) Parsa S, Ortega-Molina A, Tam W, Socci N, Wendel H
Citation(s) 33569544
Submission date Dec 19, 2019
Last update date Feb 16, 2021
Contact name Sara Parsa
E-mail(s) parsas@mskcc.org
Phone 9493004413
Organization name Memorial Sloan-Kettering Cancer Center
Department Cancer Biology and Genetics
Lab Wendel Lab
Street address 408 E 69th st, Z-1335
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM4225604 GW1F
GSM4225605 GW2F
GSM4225606 GW3F
This SubSeries is part of SuperSeries:
GSE142336 The serine hydroxymethyltransferase-2 (SHMT2) initiates lymphoma development through epigenetic tumor suppressor silencing.
Relations
BioProject PRJNA596663
SRA SRP238213

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142334_Proj_3970_htseq_all_samples.txt.gz 1.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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