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Series GSE141791 Query DataSets for GSE141791
Status Public on Aug 23, 2020
Title ChIP-seq analysis of Ssrp1 and Usp7 in mESCs
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary FACT was discovered to be a repressor of transcription in mES cells. In addition, the murine endogenous retrovirus were repressed by various mechanisms. Hence, we examined the possibility for Ssrp1 as a repressor of MT2/MERVL.
Overall design We performed CHIP-seq analysis in order to identifiy the binding sites of Ssrp1 in wild-type mESCs and perform enrichment analysis of Usp7 after Ssrp1 knockout.
Contributor(s) Chen F, Zhang W, Lu X
Citation(s) 32894293
Submission date Dec 10, 2019
Last update date Oct 26, 2020
Contact name Weiyu Zhang
Phone 18902012072
Organization name Nankai University
Street address No.38 Tongyan Road, Jinnan District
City Tainjin
ZIP/Postal code 300350
Country China
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (8)
GSM4711595 Ssrp1 KO Input
GSM4711596 Ssrp1 KO Usp7
GSM4711597 Wildtype Input
BioProject PRJNA594736
SRA SRP235597

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Supplementary file Size Download File type/resource 577.4 Mb (ftp)(http) BW 492.2 Mb (ftp)(http) BW 642.9 Mb (ftp)(http) BW 594.1 Mb (ftp)(http) BW 820.2 Mb (ftp)(http) BW
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Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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