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Series GSE140449 Query DataSets for GSE140449
Status Public on Aug 28, 2020
Title ANTICANCER AGENT P-bi-TAT LINKS THE THYROID HORMONE RECEPTOR ON INTEGRIN αvβ3 TO CANCER CELL METABOLISM/ATP GENERATION II
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Microarray analysis was carried out on human GBM cells exposed to P-bi-TAT (10-6 M tetrac equivalent) for 24 h. P-bi-TAT significantly downregulated electron transport chain genes ATP5A1 (ATP synthase A1), ATP51, ATP5G2, COX6B1 (cytochrome c oxidase subunit 6B1), NDUFA8 (NADH dehydrogenase [ubiquinone] FA8), NDUFV2 and other NDUF genes, SLC25A6 (solute carrier group 2), UCP2 ([mitochondrial] uncoupling protein 2) and COX5A. The NDUF and ATP genes are also relevant to control of oxidative phosphorylation and transcription. Six additional NDUF genes linked to oxidative phosphorylation were affected. Conclusions. P-bi-TAT caused downregulation of expression of a panel of genes involved in electron transport, oxidative phosphorylation, and cytoplasmic ribosomal protein generation in GBM cells. A key component of the anticancer activity of P-bi-TAT relates to disordering of ATP generation mechanisms in tumor cells.
 
Overall design Studied the anticancer functions of P-bi-TAT in GBM cells in terms of modulation of transcription by the drug of genes essential to cancer cell mitochondrial function. Compared with triplicate GBM U87MG cells with GBM U87MG cells treated with P-bi-TAT (30 µM) for 24 h.
 
Contributor(s) Glinsky GV, Godugu K, Sudha T, Rajabi M, Chittur SV, Mousa SA, Davis PJ
Citation(s) 35448512
Submission date Nov 15, 2019
Last update date Apr 27, 2022
Contact name Sridar V Chittur
E-mail(s) schittur@albany.edu
Phone 518-591-7215
Organization name SUNY-University at Albany
Department Center for Functional Genomics
Lab Microarray Core
Street address One Discovery Drive, CRC 342G
City Rensselaer
State/province NY
ZIP/Postal code 12144
Country USA
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (6)
GSM4162092 U87MG UNTREATED Rep. 1
GSM4162093 U87MG UNTREATED Rep. 2
GSM4162094 U87MG UNTREATED Rep. 3
Relations
BioProject PRJNA589775

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE140449_RAW.tar 6.5 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table

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