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Series GSE140409 Query DataSets for GSE140409
Status Public on Dec 21, 2019
Title Microarray of CLOCK knockdown in GSC272 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We used microarrays to study the global gene expression and identified differentially expressed genes in CLOCK inducibel shRNA knockdown GSC272 cells, aiming to identify genes and pathways that are regulated by CLOCK.
 
Overall design CLOCK knockdown cells were generated by an inducible shRNA CLOCK knowdown system. The samples used in the microarray analysis were in duplicate.
 
Contributor(s) Chen P, DePinho RA
Citation(s) 31919052
Submission date Nov 14, 2019
Last update date Jan 12, 2020
Contact name Peiwen Chen
E-mail(s) peiwenchen08@gmail.com
Phone 3125033822
Organization name Northwestern University
Street address 303 East Superior Street, Suite 6-512
City CHICAGO
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (4)
GSM4160797 GSC272_ishC_Rep1
GSM4160798 GSC272_ishC_Rep2
GSM4160799 GSC272_ishCLOCK_Rep1
Relations
BioProject PRJNA589618

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE140409_RAW.tar 96.2 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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