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Series GSE140346 Query DataSets for GSE140346
Status Public on Apr 02, 2020
Title Next Generation Sequencing Facilitates Quantitative Analysis of PHB-knockdown and PHB-knockout Spermatocytes Transcriptomes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We analyzed the transcriptomic differences of cultured mouse spermatocytes (GC2 cells) stably transfected with PHB-targeting shRNA (called PHB KD GC2) from those with a control shRNA (called Ctrl GC2). Furthermore, we also analyzed the difference in the transcriptomes of spermatocytes between Phb conditional knock-out and control mice.
 
Overall design Examination of mRNAs in Ctrl GC2 cells, PHB KD GC2 cells and spermatocytes from Phb conditional knock-out and control mice. Three biological replicates of each sample were analyzed.
 
Contributor(s) Zhang L, Chen H
Citation(s) 32232334
Submission date Nov 13, 2019
Last update date Apr 02, 2020
Contact name Lingfei Zhang
E-mail(s) lingfeizhang@sibcb.ac.cn
Organization name Shanghai Medical College Fudan University
Street address 138 Yixueyuan Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200032
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (12)
GSM4159704 GC2-Ctrl-rep1
GSM4159705 GC2-Ctrl-rep2
GSM4159706 GC2-Ctrl-rep3
Relations
BioProject PRJNA589316
SRA SRP229743

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE140346_RAW.tar 6.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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