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Series GSE13975 Query DataSets for GSE13975
Status Public on Feb 01, 2009
Title Effects of labelling fetal MSC with MRI Particles: MGIO and Ferucarbotran
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cell tracking is enabled by incubating ex vivo cells with commercially/clinically available MRI particulate label, such as ferucarbotran. However, the uptake by non-phagocytic cells, such as mesenchymal stem cell (MSC) is poor, and the detection by MRI is impeded. MGIO is a new label that is efficiently taken up by MSC. The proliferation and differentiation capacity of labelled cells are usually assessed to determine cytotoxicity. In this study, we compared the global gene expression profiles of mock-labelled, ferucarbotran-labelled and MGIO-labelled fetal MSC.
 
Overall design Fetal MSC were labelled at passage 5, washed with PBS to remove excess labels, detached by trypsin, pelleted by centrfugation and lysed for RNA extraction with the RNeasy mini kit (Qiagen) in triplicates.
 
Contributor(s) Lee E, Chan J, Wang S
Citation(s) 19544438
Submission date Dec 15, 2008
Last update date Mar 25, 2019
Contact name Eddy Shoo-Ming Lee
Organization name University of Queensland
Lab UQCCR
Street address Royal Brisbane and Women's Hospital
City Herston
State/province Queensland
ZIP/Postal code 4029
Country Australia
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (9)
GSM346543 Mock-labelled fMSC Control 1
GSM348304 Mock-labelled fMSC Control 2
GSM348305 Mock-labelled fMSC Control 3
Relations
BioProject PRJNA110229

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13975_RAW.tar 47.8 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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