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Series GSE139543

Query DataSets for GSE139543

Status

Public on Mar 16, 2020

Title

Chromatin binding protein PHF6 regulates activity-dependent transcription networks to promote hunger response [RNA-Seq]

Organism

Mus musculus

Experiment type

Expression profiling by high throughput sequencing

Summary

We revealed that PHF6 bound to the promoters of a subset of neuronal immediate-early genes (IEGs) and regulate their expression levels. hunger state.

Overall design

Examination of differentially expressed genes under fed and fasted conditions in wild type and PHF6 conditional knockout mice.

Contributor(s)

Huang J, Li Q

Citation(s)

32187544

Submission date

Oct 29, 2019

Last update date

Jun 15, 2020

Contact name

Qian Li

E-mail(s)

liqian@shsmu.edu.cn

Organization name

Shanghai Jiao Tong University School of Medicine

Department

Department of Anatomy and Physiology

Street address

280 South Chongqing Road, Building No.5, Room 408

City

Shanghai

ZIP/Postal code

200025

Country

China

Platforms (1)

GPL21273

HiSeq X Ten (Mus musculus)

Samples (20)

More...

GSM4143502	Agrp_neurons_RNA_seq_WT-1_Fed_condition
GSM4143503	Agrp_neurons_RNA_seq_WT-2_Fed_condition
GSM4143504	Agrp_neurons_RNA_seq_WT-3_Fed_condition

This SubSeries is part of SuperSeries:

GSE139545

Chromatin binding protein PHF6 regulates activity-dependent transcription networks to promote hunger response

Relations

BioProject

PRJNA580230

SRA

SRP227346

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE139543_normalized_counts_all.csv.gz	1.6 Mb	(ftp)(http)	CSV
GSE139543_raw_counts_all.csv.gz	603.6 Kb	(ftp)(http)	CSV
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Processed data are available on Series record