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| Status |
Public on Feb 21, 2023 |
| Title |
Postnatal Oogenesis In the Naked Mole Rat |
| Organism |
Heterocephalus glaber |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The goal of this analysis is to compare the transcriptome profile (RNA-seq) along different developmental ages in the naked mole rat ovary
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| Overall design |
Methods: Naked mole rat mRNA profiles of wiltype embryonic day 56, postnatal day 1, 8, 28, and 90 day-old. Ovaries were collected from wildtype subordinate animals. Duplicates and triplicates were collected following the same protocol and same litter.
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| Contributor(s) |
Brienño-Enriquez MA, Faykoo-Martinez M, Goben M, McGrath A, Prado A, Wagner K, Cohen PE, Laird DJ, Holmes MM, Place NJ, Grenier JK |
| Citation(s) |
36810851 |
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| Submission date |
Oct 28, 2019 |
| Last update date |
Mar 09, 2023 |
| Contact name |
Jennifer K Grenier |
| Organization name |
Cornell University
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| Department |
Biomedical Sciences
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| Lab |
Biotechnology Building rm 333
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| Street address |
526 Campus Rd
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| City |
Ithaca |
| State/province |
NY |
| ZIP/Postal code |
14853 |
| Country |
USA |
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| Platforms (1) |
| GPL24046 |
Illumina NextSeq 500 (Heterocephalus glaber) |
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| Samples (13)
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| Relations |
| BioProject |
PRJNA580018 |
| SRA |
SRP227269 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE139515_gene_exp.diff.gz |
11.1 Mb |
(ftp)(http) |
DIFF |
| GSE139515_genes.read_group_tracking.txt.gz |
10.4 Mb |
(ftp)(http) |
TXT |
| GSE139515_transcriptome_annot.gtf.gz |
15.9 Mb |
(ftp)(http) |
GTF |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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