NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE138924 Query DataSets for GSE138924
Status Public on Jul 16, 2020
Title Differential contribution of p300 and CBP to regulatory elements in mESCs [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In this study we analyze the individual contribution of p300 and CBP to the H3K27ac landscape, chromatin accessibility, and transcription in mESC.
 
Overall design RNA-Seq analysis in mouse embryonic stem cells (Ctl, p300 and CBP knock down).
 
Contributor(s) Martire S, Banaszynski LA
Citation(s) 32690000
Submission date Oct 15, 2019
Last update date Feb 22, 2023
Contact name Laura Banaszynski
E-mail(s) laura.banaszynski@UTSouthwestern.edu
Organization name University of Texas Medical Center
Department Green Center for Reproductive Biology Sciences
Street address 5323 Harry Hines Blvd
City Dallas
State/province TEXAS
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (8)
GSM4123021 ESC_p300Ctl_RNA-seq_rep1
GSM4123022 ESC_p300Ctl_RNA-seq_rep2
GSM4123023 ESC_p300KD_RNA-seq_rep1
This SubSeries is part of SuperSeries:
GSE138925 Differential contribution of p300 and CBP to regulatory elements in mESCs
Relations
BioProject PRJNA577737
SRA SRP225823

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138924_RAW.tar 815.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap