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Series GSE138277 Query DataSets for GSE138277
Status Public on Jul 10, 2020
Title dAKAP1 signaling complexes coordinate local synthesis at the mitochondrial surface
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary We find that the KH domain of dAKAP1 binds mRNAs encoding proteins required for mitochondrial metabolism
 
Overall design total RNA was incubated with purified protein of dAKAP1 KH and Tudor domains (KHT) followed by immunoprecipitation for protein tag; 4-5 replicates were performed for input RNA, KHT, and negative controls
 
Contributor(s) John S
Citation(s) 32482893
Submission date Oct 01, 2019
Last update date Jul 10, 2020
Contact name John Scott
E-mail(s) scottjdw@uw.edu
Phone 206-616-3340
Organization name University of Washington
Department Pharmacology
Street address 1959 NE Pacific Street, HSB K316
City Seattle
State/province Washington
ZIP/Postal code 98195
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (13)
GSM4104293 NEG_1
GSM4104294 NEG_2
GSM4104295 NEG_3
Relations
BioProject PRJNA575262
SRA SRP223905

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138277_dAKAP1_KHT_count_matrix.tsv.gz 310.1 Kb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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