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Series GSE137768 Query DataSets for GSE137768
Status Public on Dec 31, 2019
Title Glucocorticoids paradoxically facilitate steroid resistance in subsets of T-cell acute lymphoblastic leukemias and normal thymocytes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Glucocorticoids (GCs) are a central component of therapy for patients with T-cell acute lymphoblastic leukemia (T-ALL) and while resistance to GCs is a strong negative prognostic indicator in T-ALL, mechanisms of GC resistance remain poorly understood. Using diagnostic samples from patients enrolled on the frontline Children’s Oncology Group (COG) T-ALL clinical trial AALL1231, we demonstrate that one-third of primary T-ALLs are resistant to GCs when cultured in the presence of interleukin-7 (IL7), a cytokine that is critical for normal T-cell function and that plays a well-established role in leukemogenesis. We demonstrate that in these T-ALLs and in distinct populations of normal developing thymocytes, GCs paradoxically induce their own resistance by promoting upregulation of IL7 receptor (IL7R) expression. In the presence of IL7, this augments downstream signal transduction resulting in increased STAT5 transcriptional output, which leads to upregulation of the pro-survival protein BCL-2. Taken together, these data demonstrate that IL7 mediates an intrinsic and physiologic mechanism of GC resistance in normal thymocyte development that is retained during leukemogenesis in a subset of T-ALLs and is reversible with targeted inhibition of the IL7R/JAK/STAT5/BCL-2 axis.
 
Overall design Transcriptomes of primary human T-cell acute lymphoblastic leukemias were generated by extracting RNA from primary bone marrow specimens and sequenced using Illumina-based methods.
 
Contributor(s) Meyer L, Huang B, Shannon K, Teachey D, Hermiston M
Citation(s) 31687977
Submission date Sep 20, 2019
Last update date Apr 01, 2020
Contact name Benjamin Huang
Organization name University of California San Francisco
Street address 1450 3rd Street
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (75)
GSM4087043 teachey-01
GSM4087044 teachey-02
GSM4087045 teachey-03
Relations
BioProject PRJNA572580
SRA SRP222752

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137768_meyer_tall1231_logcpm_teacheyIDs.tsv.gz 3.1 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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