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Series GSE137308 Query DataSets for GSE137308
Status Public on Sep 14, 2019
Title RNA sequencing for lncRNA, miRNA and mRNA expression analysis in human laryngeal cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Accumulating evidence indicates that long noncoding RNAs can interact with microRNAs to regulate target mRNAs through competing interactions. However, this mechanism remains largely unexplored in laryngeal squamous cell carcinoma. In this study, transcriptome-wide RNA sequencing in 3 pairs of laryngeal squamous cell carcinoma tissues and adjacent normal tissues was performed to investigate the expression profiles of lncRNAs, miRNAs and mRNAs.
 
Overall design 3 laryngeal squamous cell carcinoma tissues and 3 related adjacent normal tissues
 
Contributor(s) Lyu K, Li Y, Lei W, Xu Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 12, 2019
Last update date Sep 16, 2019
Contact name kexing Lyu
E-mail(s) lvkexinging@gmail.com
Organization name Sun Yat-sen University
Department Otorhinolaryngology
Street address 58 Zhongzhan Road II, Yuexiu Distict
City Guangzhou
State/province Guangdong
ZIP/Postal code 510080
Country China
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM4075022 17EF018T seq [lncRNA and mRNA-seq]
GSM4075023 17EF018N seq [lncRNA and mRNA-seq]
GSM4075024 17EF024T seq [lncRNA and mRNA-seq]
Relations
BioProject PRJNA565403
SRA SRP221590

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137308_all_mirna.exp_profile.xls.gz 173.3 Kb (ftp)(http) XLS
GSE137308_allsymbol.isoforms.expression.xls.gz 10.1 Mb (ftp)(http) XLS
GSE137308_lncRNA-different_expression_T-TEST_FC_1.5_.xlsx 34.2 Kb (ftp)(http) XLSX
GSE137308_mRNA-different_expression_T-TEST_FC_2_.xlsx 560.6 Kb (ftp)(http) XLSX
GSE137308_miRNA-different_expression_T-TEST_FC_2_.xlsx 14.4 Kb (ftp)(http) XLSX
GSE137308_readme.txt 161 b (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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