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GEO accession:
Series GSE136228
Query DataSets for GSE136228
Status
Public on Jan 14, 2022
Title
Genome-wide analysis of replication timing in ESC and 2CLC
Organism
Mus musculus
Experiment type
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Aug 22, 2019
Last update date
Feb 22, 2022
Contact name
Fei Ji
Organization name
Massachusetts General Hospital
Street address
185 Cambridge St
City
Boston
ZIP/Postal code
02129
Country
USA
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (30)
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GSM4042921
GFP-(ESC) Early Repli-seq rep1
GSM4042922
GFP-(ESC) Early Repli-seq rep2
GSM4042923
GFP-(ESC) Mid Repli-seq rep1
GSM4042924
GFP-(ESC) Mid Repli-seq rep2
GSM4042925
GFP-(ESC) Late Repli-seq rep1
GSM4042926
GFP-(ESC) Late Repli-seq rep2
GSM4042927
GFP+(ESC) Early Repli-seq rep1
GSM4042928
GFP+(ESC) Early Repli-seq rep2
GSM4042929
GFP+(ESC) Mid Repli-seq rep1
GSM4042930
GFP+(ESC) Mid Repli-seq rep2
GSM4042931
GFP+(ESC) Late Repli-seq rep1
GSM4042932
GFP+(ESC) Late Repli-seq rep2
GSM4042933
Transitional GFP- Early Repli-seq rep1
GSM4042934
Transitional GFP- Early Repli-seq rep2
GSM4042935
Transitional GFP- Mid Repli-seq rep1
GSM4042936
Transitional GFP- Mid Repli-seq rep2
GSM4042937
Transitional GFP- Late Repli-seq rep1
GSM4042938
Transitional GFP- Late Repli-seq rep2
GSM4042939
Transitional GFP+ Early Repli-seq rep1
GSM4042940
Transitional GFP+ Early Repli-seq rep2
GSM4042941
Transitional GFP+ Mid Repli-seq rep1
GSM4042942
Transitional GFP+ Mid Repli-seq rep2
GSM4042943
Transitional GFP+ Late Repli-seq rep1
GSM4042944
Transitional GFP+ Late Repli-seq rep2
GSM4498305
siControl rep1
GSM4498306
siControl rep2
GSM4498307
siUSP7-GFP(-) rep1
GSM4498308
siUSP7-GFP(-) rep2
GSM4498309
siUSP7-GFP(+) rep1
GSM4498310
siUSP7-GFP(+) rep2
This SuperSeries is composed of the following SubSeries:
GSE136226
Genome-wide analysis of replication timing in ESC and 2CLC [stable]
GSE136227
Genome-wide analysis of replication timing in ESC and 2CLC during 2CLC emergence [transitional]
GSE149341
RNA-seq of control and USP7 siRNA transfected ES and 2-cell like cells
Relations
BioProject
PRJNA561656
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE136228_RAW.tar
29.7 Mb
(http)
(custom)
TAR (of BIGWIG, TXT)
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