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Series GSE136048 Query DataSets for GSE136048
Status Public on Sep 30, 2019
Title Placental Accreta Spectrum: Upregulated Cytotrophoblast DOCK4 Contributes to Over Invasion
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In humans, a subset of placental cytotrophoblasts (CTBs) invades the uterus and its vasculature, anchoring the pregnancy and ensuring adequate blood flow to the fetus. Appropriate depth is critical. Shallow invasion increases the risk of pregnancy complications, e.g., severe preeclampsia. Overly deep invasion, the hallmark of placenta accreta spectrum (PAS), increases the risk of pre-term delivery, hemorrhage and death. Previously a rare condition, the incidence of PAS has increased to 1:731 pregnancies, likely due to the rise in uterine surgeries (e.g., Cesarean sections). CTBs track along the scars deep into the myometrium and beyond. Here we compared the global gene expression patterns of CTBs from PAS cases to gestational age-matched control cells that invaded to the normal depth from preterm birth (PTB) deliveries. The mRNA encoding the guanine nucleotide exchange factor, DOCK4, mutations of which promote cancer cell invasion and angiogenesis, was the most highly differentially expressed molecule in PAS samples. Over-expression of DOCK4 increased CTB invasiveness, consistent with the PAS phenotype. Also, this analysis identified other genes with significantly altered expression in this disorder, potential biomarkers. These data suggest that CTBs from PAS cases up regulate a cancer-like pro-invasion mechanism, suggesting molecular as well as phenotypic similarities in the two pathologies.
 
Overall design Expression profiling of placental cytotrophoblasts from PAS patients and healthy controls.
 
Contributor(s) McNally L, Zhou Y, Robinson JF, Zhao G, Chen L, Chen H, Kim MY, Kapidzic M, Gormley M, Fisher SJ
Citation(s) 32576693
Submission date Aug 20, 2019
Last update date Jul 27, 2020
Contact name M. Yvonne Kim
E-mail(s) yvonne.kim@ucsf.edu
Organization name UC San Francisco
Street address 3rd st.
City San Francisco
State/province CA
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (9)
GSM4040088 PTL1
GSM4040089 PTL2
GSM4040090 PTL3
Relations
BioProject PRJNA561109

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136048_RAW.tar 210.5 Mb (http)(custom) TAR (of CEL)
GSE136048_accreta_output.txt.gz 7.1 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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