|
| Status |
Public on Aug 17, 2019 |
| Title |
RNA sequencing of axillary buds from annual and biennial flowering raspberry |
| Organism |
Rubus idaeus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We compared gene expression in axillary buds from annual and biennial flowering raspberry to identify differentially expressed genes.
|
| |
|
| Overall design |
Three biological replicates of RNA from each genotype was sequenced using Illumina paried-end sequencing. Differentially expressed genes were identified using DESeq2.
|
| |
|
| Contributor(s) |
Foster T, Jibran R |
| Citation(s) |
31708950 |
| BioProject |
PRJNA560307 |
| |
| Submission date |
Aug 16, 2019 |
| Last update date |
Nov 19, 2019 |
| Contact name |
rubina jibran |
| E-mail(s) |
rubina.jibran@plantandfood.co.nz
|
| Phone |
02108800950
|
| Organization name |
Plant and Food Research
|
| Street address |
Tennent Drive
|
| City |
Palmerston North |
| ZIP/Postal code |
4474 |
| Country |
New Zealand |
| |
|
| Platforms (1) |
| GPL27099 |
Illumina NovaSeq 6000 (Rubus idaeus) |
|
| Samples (6)
|
|
| Relations |
| SRA |
SRP218569 |
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