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Series GSE135792 Query DataSets for GSE135792
Status Public on Jul 17, 2020
Title The effect on the lack of ILCs on the colon of mice exposed to DSS colitis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Anti CD90 was used to deplete ILCs in Rag mice prior to the induction of colitis. After 6 days the mice were culled and RNASeq performed on RNA extracted from the Colon
Overall design 12 mice, 6 were treated with DSS and 6 control mice
Contributor(s) Ferdinand JR, Castro-Dopico T, Clatworthy MR
Citation(s) 32640223
Submission date Aug 13, 2019
Last update date Jul 20, 2020
Contact name John Robert Ferdinand
Organization name University of Cambridge
Street address Department of Medicine
City Cambridge
ZIP/Postal code CB2 0QH
Country United Kingdom
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (10)
GSM4030268 Control_1 [C1_S6]
GSM4030269 Control_2 [C2_S7]
GSM4030270 Control_3 [C3_S8]
BioProject PRJNA560066
SRA SRP218245

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135792_CountTable.csv.gz 397.3 Kb (ftp)(http) CSV
GSE135792_Normcounts.csv.gz 1.2 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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